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AT1G26240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26240" - Proline-rich extensin-like family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26240Proline-rich extensin-like family protein (478 aa)    
Predicted Functional Partners:
AT3G28550
Proline-rich extensin-like family protein (1018 aa)
     
   
  0.942
AT5G04790
Uncharacterized protein (54 aa)
           
  0.924
AT1G75180
Erythronate-4-phosphate dehydrogenase family protein (315 aa)
           
  0.924
AT5G42010
transducin/WD40 domain-containing protein (709 aa)
           
  0.679
AT5G42830
HXXXD-type acyl-transferase-like protein (450 aa)
           
  0.676
AT3G59080
Aspartyl protease family protein (535 aa)
           
  0.670
AT3G06640
PAS domain-containing tyrosine kinase-like protein (730 aa)
           
  0.670
CYP71B6
Cytochrome P450 71B6 (503 aa)
           
  0.670
SBT3.5
Subtilase-like protein; Serine protease that cleaves the pectin methylesterase 17 (PME17) protein to release the PME17 mature form in the apoplasm (774 aa)
           
  0.670
AATP1
AAA-ATPase 1; Required to regulate morphology and anatomy during seed maturation (514 aa)
           
  0.638
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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