STRINGSTRING
AT1G26330 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26330" - DNA binding in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26330DNA binding (1194 aa)    
Predicted Functional Partners:
EMB2795
EMBRYO DEFECTIVE 2795; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Essential protein (671 aa)
     
        0.472
HIK
HINKEL; Probable plus end-directed motor protein that functions in a MAP kinase signaling pathway (ANP1-MKK6-MPK4), which is essential for somatic cell cytokinesis, especially for the cell- plate formation and its expansion. Regulates the activity and the localization of ANP1, probably by association through the non- catalytic region of the kinase. Functionally redundant with NACK2 and essential to promote the progression of cytokinesis and for cellularization (formation of the cell plate) during microgametogenesis and megagametogenesis (974 aa)
     
        0.463
RPA70B
RPA70-kDa subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity). Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity) (604 aa)
     
        0.461
AT1G27880
ATP-dependent DNA helicase Q-like 5; 3’-5’ DNA helicase that may play a role in the repair of DNA (911 aa)
     
        0.461
CYCB3;1
Cyclin B3-1 (648 aa)
     
        0.461
ICU2
INCURVATA2; Polymerase alpha in a complex with DNA primase is a replicative polymerase (1524 aa)
     
        0.457
CTF18
CHROMOSOME TRANSMISSION FIDELITY 18 (943 aa)
     
        0.451
PRL
PROLIFERA; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells (By similarity). Required for megagametophyte and embryo development (716 aa)
     
        0.449
SMC2
SMC2-1 (SMC2); Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis (1175 aa)
     
        0.446
CSLD5
1,4-beta-D-xylan synthase; Involved in stem and root growth. Possesses xylan and homogalacturonan synthase activity (1181 aa)
     
        0.446
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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