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AT1G26400 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26400" - FAD-binding Berberine family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26400FAD-binding Berberine family protein; Probable flavin-dependent oxidoreductase (527 aa)    
Predicted Functional Partners:
AT5G38550
Jacalin lectin family protein (594 aa)
           
  0.829
AT5G48280
Uncharacterized protein (145 aa)
           
  0.739
AT1G53860
Remorin-like protein (442 aa)
           
  0.739
DML2
Demeter-like 2; Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5- methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity) (1332 aa)
           
  0.731
ROS4
REPRESSOR OF SILENCING 4; Histone H3 acetyltransferase that binds methylated DNA at chromatin sites lacking histone H3K4 di- or trimethylation and catalyzes H3K18 and H3K23 acetylation (PubMed-22733760, PubMed-22700931). Prevents the transcriptional silencing of transgenes and of some endogenous genes (PubMed-22733760, PubMed-22700931). Requires the presence of IDM2 for efficient H3K18 acetylation, but not for H3K23 acetylation (PubMed-25002145) (1189 aa)
           
  0.730
NUDT22
Nudix hydrolase 22; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives (302 aa)
         
  0.707
AT4G18650
Transcription factor-related protein (232 aa)
           
  0.678
DML3
DEMETER-like protein 3; Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5- methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity) (1044 aa)
           
  0.676
AT5G42940
RING/U-box superfamily protein (691 aa)
           
  0.670
AT5G35730
EXS (ERD1/XPR1/SYG1) domain protein (457 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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