STRINGSTRING
AT1G26420 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26420" - FAD-binding Berberine family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26420FAD-binding Berberine family protein; Probable flavin-dependent oxidoreductase (529 aa)    
Predicted Functional Partners:
AT1G26380
FAD-binding Berberine family protein; Flavin-dependent oxidoreductase involved in the biosynthetic pathway to 4-hydroxyindole-3-carbonyl nitrile (4-OH- ICN), a cyanogenic metabolite required for inducible pathogen defense. Converts indole cyanohydrin into indole-3-carbonyl nitrile (ICN) (535 aa)
   
     
0.840
AT3G18250
Putative membrane lipoprotein (76 aa)
     
        0.818
AT5G38900
Thioredoxin superfamily protein (217 aa)
     
        0.803
AT1G51890
Putative leucine-rich repeat protein kinase (876 aa)
     
        0.788
PAD3
Cytochrome P450 71B15; Multifunctional enzyme involved in the biosynthesis of the indole-derived phytoalexin camalexin. Catalyzes two reactions, the formation of dihydrocamalexate from indole-3-acetonitrile- cysteine conjugate and the oxidative decarboxylation of dihydrocamalexate which is the final step in camalexin biosynthesis. Required for the resistance to the fungal pathogens A.brassicicola, B.cinerea, B.elliptica, B.tulipae, L.maculans and Colletotrichum higginsianum. Seems not to be required for resistance to P.syringae, P.porri, and not involved in age-related resistance (490 aa)
     
 
  0.783
CYP71A12
Cytochrome P450 71A12; Converts indole-3-acetaldoxime to indole cyanohydrin. Involved in the biosynthetic pathway to 4-hydroxyindole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic metabolite required for inducible pathogen defense (503 aa)
     
 
  0.777
AT1G74360
Leucine-rich repeat protein kinase family protein (1106 aa)
     
   
  0.761
AT5G25260
Flotillin-like protein 2; May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles (463 aa)
     
        0.747
AT2G18690
Uncharacterized protein (322 aa)
     
        0.742
GSTU10
Glutathione S-transferase TAU 10; May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides (232 aa)
     
        0.737
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (12%) [HD]