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AT1G26530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26530" - PIN domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26530PIN domain-containing protein (178 aa)    
Predicted Functional Partners:
AT5G08420
RNA-binding KH domain-containing protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (391 aa)
     
  0.991
AT1G06720
BMS1 and NUC121 domain-containing protein (1147 aa)
     
 
  0.975
AT3G06530
ARM repeat superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (2199 aa)
     
    0.971
EDA14
EMBRYO SAC DEVELOPMENT ARREST 14; Involved in nucleolar processing of pre-18S ribosomal RNA (228 aa)
     
 
    0.971
AT3G09720
DEAD-box ATP-dependent RNA helicase 57 (541 aa)
     
 
    0.970
AT3G05060
Putative nucleolar protein 5-2; Required for 60S ribosomal subunit biogenesis (533 aa)
     
    0.969
AT5G27140
NOP56-like pre RNA processing ribonucleoprotein; Required for 60S ribosomal subunit biogenesis (445 aa)
     
    0.969
AT5G27120
Putative nucleolar protein 5-1; Required for 60S ribosomal subunit biogenesis (533 aa)
     
    0.968
EMB2777
EMBRYO DEFECTIVE 2777 (654 aa)
     
 
  0.968
AT3G28230
Uncharacterized protein (174 aa)
     
 
  0.967
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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