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SDG35 protein (Arabidopsis thaliana) - STRING interaction network
"SDG35" - SET domain protein 35 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
SDG35SET domain protein 35 (545 aa)    
Predicted Functional Partners:
SDG29
SET domain group 29; Histone methyltransferase (1043 aa)
     
 
  0.911
SDG25
SET domain protein 25; Histone methyltransferase involved in regulation of flowering time. Required for the expression of the flowering repressors FLC and MADS-box genes of the MAF family (PubMed-19726574, PubMed-19855050). Required for histone H3 dimethylation on ’Lys-36’ H3K36me2 at the FLC locus (PubMed-19726574). Required for histone H3 trimethylation on ’Lys- 4’ H3K4me3 at the FLC locus. Prevents trimethylation on ’Lys-27’ H3K276me3 at the same locus (PubMed-19855050). Involved in the control of seed dormancy and germination (PubMed-21799800) (1423 aa)
       
 
  0.908
SDG14
SET domain protein 14; Histone methyltransferase (1018 aa)
     
 
  0.874
SET27
Homologue of trithorax; Histone methyltransferase. Methylates ’Lys-4’ of histone H3. H3 ’Lys-4’ methylation represents a specific tag for epigenetic transcriptional activation. Required to maintain the active state of class A (AP1 and AP2), class B (PI and AP3) and class C (AG) floral homeotic genes at early stages of flower development. Regulates floral organ identity and flowering transition. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (1062 aa)
     
 
  0.873
ATXR6
ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6; Histone methyltransferase that specifically monomethylates ’Lys-37’ of histone H3 (H3K27me1). Has higher activity on nucleosomes containing H3.1 than H3.3. Involved in the formation of constitutive heterochromatin and the silencing of heterochromatic elements. May act as a positive regulator of the G1-S transition. Influences which sets of rRNA gene variants are expressed or silenced. Up-regulated by E2FB (349 aa)
     
   
  0.849
ATX2
Trithorax-like protein 2; Histone methyltransferase (1083 aa)
     
 
  0.838
SDG16
SET domain protein 16; Histone methyltransferase (1027 aa)
     
 
  0.837
ASHH1
SET domain group 26; Histone methyltransferase involved in regulation of flowering time. Required for the expression of the SOC1/AGL20 gene. Required for histone H3 trimethylation on ’Lys-4’ H3K4me3 at the SOC1 locus. Prevents trimethylation on ’Lys-27’ H3K276me3 at the same locus (492 aa)
     
   
  0.805
ATXR5
ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5; Histone methyltransferase that specifically monomethylates ’Lys-37’ of histone H3 (H3K27me1). Has much higher activity on nucleosomes containing H3.1 than H3.3. Involved in the formation of constitutive heterochromatin and the silencing of heterochromatic elements. Influences which sets of rRNA gene variants are expressed or silenced (379 aa)
           
  0.802
FIE
FERTILIZATION-INDEPENDENT ENDOSPERM; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Probably also involved in [...] (369 aa)
     
  0.776
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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