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AT1G26930 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26930" - F-box/kelch-repeat protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26930F-box/kelch-repeat protein (421 aa)    
Predicted Functional Partners:
AT3G21600
Senescence/dehydration-associated protein-related (374 aa)
     
   
  0.828
AT4G39750
F-box-related protein (146 aa)
           
  0.737
AT2G03460
Galactose oxidase/kelch-like protein (257 aa)
           
  0.674
AXS2
UDP-apiose/xylose synthase; Catalyzes the conversion of UDP-D-glucuronate to a mixture of UDP-D-apiose and UDP-D-xylose. D-Apiose (3-C- hydroxymethyl-d-erythrose) is the only plant cell wall monosaccharide with a branched carbon skeleton and is found in rhamnogalacturonan II (RG-II), apiogalacturonan, and several apioglycosides (By similarity) (389 aa)
           
  0.670
NAKR1
SODIUM POTASSIUM ROOT DEFECTIVE 1 (319 aa)
           
  0.636
AT2G38010
Neutral ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid (792 aa)
           
  0.633
AT1G59740
Putative peptide/nitrate transporter (591 aa)
           
  0.603
PSD2
Phosphatidylserine decarboxylase 2; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production (635 aa)
           
  0.602
VFB1
VIER F-box protein 1 (518 aa)
           
  0.560
PSD3
Phosphatidylserine decarboxylase 3; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production (635 aa)
           
  0.554
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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