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AtHB23 protein (Arabidopsis thaliana) - STRING interaction network
"AtHB23" - Encodes a homeodomain leucine zipper class I (HD-Zip I) protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtHB23Encodes a homeodomain leucine zipper class I (HD-Zip I) protein; Belongs to the HD-ZIP homeobox family. Class I subfamily (255 aa)    
Predicted Functional Partners:
AT4G31270
Sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is- Homeodomain-like superfamily protein (TAIR-AT2G33550.1); Has 462 Blast hits to 461 proteins in 32 species- Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 436; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (294 aa)
           
  0.903
AT1G11510
DNA-binding storekeeper protein-related transcriptional regulator; Contains the following InterPro domains- Protein of unknown function DUF573 (InterPro-IPR007592); BEST Arabidopsis thaliana protein match is- DNA-binding storekeeper protein-related transcriptional regulator (TAIR-AT1G61730.1); Has 6244 Blast hits to 2746 proteins in 297 species- Archae - 0; Bacteria - 3717; Metazoa - 876; Fungi - 377; Plants - 483; Viruses - 20; Other Eukaryotes - 771 (source- NCBI BLink) (352 aa)
           
  0.903
HB27
Zinc-finger homeodomain protein 13; Putative transcription factor (242 aa)
       
      0.762
HB32
Zinc-finger homeodomain protein 14; Putative transcription factor (168 aa)
       
      0.762
AT1G21610
Wound-responsive family protein; May be required for replication-independent chromatin assembly; Belongs to the ubinuclein family (685 aa)
           
  0.759
AT5G14280
GLABROUS1 enhancer-binding protein-like 2; Probable transcription factor. May play redundant roles with GEBP and GPL1 in cytokinin responses by regulating the transcript levels of type-A ARR response genes. Involved in stress responses. Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (572 aa)
           
  0.739
ADA2A
Transcriptional adapter ADA2a; Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region (555 aa)
           
  0.738
HB25
Zinc-finger homeodomain protein 1; Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family (279 aa)
       
 
  0.726
HDG7
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family (682 aa)
           
  0.699
CRS1
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Required for the splicing of group IIA introns in chloroplasts, by regulating the intron folding. Forms splicing particles with RNA. May also be involved in chloroplast protein translation (720 aa)
           
  0.679
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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