STRINGSTRING
AT1G27090 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27090" - Glycine-rich protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27090Glycine-rich protein (420 aa)    
Predicted Functional Partners:
AT1G12170
F-box family protein (364 aa)
           
  0.868
AT1G80940
Uncharacterized protein (213 aa)
           
  0.863
AT2G27090
Uncharacterized protein (743 aa)
           
  0.860
AT2G15240
UNC-50-like protein (252 aa)
           
  0.849
AT2G16530
Putative polyprenol reductase 2; Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism (By similarity) (343 aa)
           
  0.808
VIP2
VIRE2 interacting protein 2; Transcriptional regulator required for Agrobacterium- mediated stable genetic transformation by T-DNA integration in host genome, but not for T-DNA transient expression (614 aa)
     
   
  0.618
PRP2
Proline-rich protein 2 (321 aa)
           
  0.558
WOX5
WUSCHEL related homeobox 5; Transcription factor, which may be involved in the specification and maintenance of the stem cells (QC cells) in the root apical meristem (RAM) (182 aa)
       
      0.543
FIM1
Fimbrin 1; Cross-links actin filaments (F-actin) in a calcium independent manner. Induces the formation of actin aggregates. Stabilizes and prevents F-actin depolymerization mediated by profilin. Key regulator of actin cytoarchitecture, probably involved in cell cycle, cell division, cell elongation and cytoplasmic tractus (687 aa)
           
  0.491
CcdA
Cytochrome c-type biogenesis ccda-like chloroplastic protein; Required for the transfer of reducing equivalents from stroma to thylakoid lumen. Involved in the biogenesis of the plastid cytochrome b6f complex by probably transferring reducing equivalents from stromal m-type thioredoxin (Trx-m) to the lumenal thioredoxin HCF164 (355 aa)
           
  0.448
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]