STRINGSTRING
AT1G27100 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27100" - Actin cross-linking protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27100Actin cross-linking protein (519 aa)    
Predicted Functional Partners:
PUP14
Purine permease 14 (393 aa)
     
        0.788
HSPRO2
HS1 PRO-1 2-like protein; Positive regulator of basal resistance (435 aa)
     
        0.766
SZF1
Salt-inducible zinc finger 1; Involved in salt stress response. May positively modulate plant tolerance to salt stress (580 aa)
     
        0.675
EXO70B1
Exocyst subunit exo70 family protein B1; Component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole (624 aa)
     
        0.673
NHL3
NDR1/HIN1-like 3; Confers resistance to Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) (231 aa)
     
        0.670
SRC2
Uncharacterized protein; May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygene species (ROS) production and may play a role in cold responses (324 aa)
     
        0.664
AT4G34150
Calcium-dependent lipid-binding domain-containing protein (247 aa)
     
        0.662
TET8
Tetraspanin8; May be involved in the regulation of cell differentiation (273 aa)
     
        0.658
PUP18
Purine permease 18 (390 aa)
     
        0.650
AT1G23710
Uncharacterized protein (295 aa)
     
        0.649
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]