• Version:
  • 11.0 (preview - - version 10.5 still available here)
AT1G27135 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27135" - Encodes a Maternally expressed gene in Arabidopsis thaliana
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
Gene Fusion
AT1G27135Encodes a Maternally expressed gene (MEG) family protein (88 aa)    
Predicted Functional Partners:
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Necessary for sister chromatid cohesion. Acts in synergy with ETG1 (943 aa)
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Atypical and probable non DNA-binding bHLH transcription factor that regulates light-mediated responses in day light conditions by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. Forms non-functional heterodimers with HFR1, causing liberation and activation of PIF4 from the transcriptionally inactive HFR1-PIF4 complex (94 aa)
EMBRYO SURROUNDING FACTOR 1-like protein 10; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in petal, leaf whorl, sepal, flower; Expressed during 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is- Maternally expressed gene (MEG) family protein (TAIR-AT2G16505.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (82 aa)
Mini-chromosome maintenance complex-binding protein; Associated component of the MCM complex that acts as a regulator of DNA replication. Binds to the MCM complex during late S phase and may act by promoting the disassembly of the MCM complex from chromatin. Required for sister chromatid cohesion; Belongs to the MCMBP family (589 aa)
Putative B3 domain-containing protein At2g27410; Domain of unknown function (DUF313) ; Contains the following InterPro domains- Protein of unknown function DUF313 (InterPro-IPR005508); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF313) (TAIR-AT2G32645.1); Has 140 Blast hits to 140 proteins in 6 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (257 aa)
S-type anion channel SLAH4; Predicted to encode a protein with similarity to the SLAC1 protein involved in ion homeostasis in guard cells (365 aa)
Pre-mRNA-splicing factor 3; Contains the following InterPro domains- Pre-mRNA-splicing factor 3 (InterPro-IPR013881); BEST Arabidopsis thaliana protein match is- Pre-mRNA-splicing factor 3 (TAIR-AT1G28060.1); Has 549 Blast hits to 518 proteins in 205 species- Archae - 0; Bacteria - 10; Metazoa - 155; Fungi - 156; Plants - 71; Viruses - 0; Other Eukaryotes - 157 (source- NCBI BLink) (437 aa)
Transcription factor-like protein DPA; Involved in the regulation of the G1/S transition. Increases the DNA binding and the transactivation activities of E2F proteins after heterodimerization. The complex DPA/E2FA promotes cell division and acts as a regulator of the endocycle. Positively regulates the activity of S phase-specific genes; Belongs to the E2F/DP family (292 aa)
RAD3-like DNA-binding helicase protein; Its function is described as in 6 functions; Involved in nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; Expressed in 9 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro-IPR002464), DEAD2 (InterPro-IPR010614), DEAD-like helicase, N-terminal (InterPro-IPR014001), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro-IPR014013), DNA helicase (DNA repair), Rad3 type (InterPro-IPR013020), Helicas [...] (882 aa)
Shugoshin; Unknown protein; Has 34 Blast hits to 34 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (207 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]