STRINGSTRING
AT1G27200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27200" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27200Uncharacterized protein (575 aa)    
Predicted Functional Partners:
AT5G16890
Exostosin family protein (511 aa)
           
  0.731
AT3G24040
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (417 aa)
           
  0.731
AT3G11320
Nucleotide-sugar transporter-like protein (308 aa)
           
  0.731
AT2G26100
Galactosyltransferase family protein; Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue (371 aa)
           
  0.731
AT1G32090
Early-responsive to dehydration stress protein (ERD4); Acts as an osmosensitive calcium-permeable cation channel (806 aa)
           
  0.731
AT1G71070
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase-like protein (395 aa)
           
  0.676
GAUT3
Galacturonosyltransferase 3; May be involved in pectin and/or xylans biosynthesis in cell walls (680 aa)
           
  0.674
AT1G11940
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (383 aa)
           
  0.674
UXS4
UDP-xylose synthase 4; Catalyzes the NAD-dependent decarboxylation of UDP- glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity) (449 aa)
           
  0.670
AT1G76400
Ribophorin I; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (614 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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