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AT1G27350.1 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27350.1" - Ribosome associated membrane protein RAMP4 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G27350.1Ribosome associated membrane protein RAMP4; Contains the following InterPro domains- Ribosome associated membrane RAMP4 (InterPro-IPR010580); BEST Arabidopsis thaliana protein match is- Ribosome associated membrane protein RAMP4 (TAIR-AT1G27330.1); Has 348 Blast hits to 348 proteins in 106 species- Archae - 0; Bacteria - 0; Metazoa - 210; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 38 (source- NCBI BLink) (68 aa)    
Predicted Functional Partners:
AT4G40042
Microsomal signal peptidase 12 kDa subunit (SPC12); Its function is described as peptidase activity; Involved in signal peptide processing; Located in endomembrane system, integral to membrane, signal peptidase complex; Contains the following InterPro domains- Microsomal signal peptidase 12kDa subunit (InterPro-IPR009542); BEST Arabidopsis thaliana protein match is- Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR-AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu [...] (93 aa)
     
   
  0.945
AT2G22425
Microsomal signal peptidase 12 kDa subunit (SPC12); Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (92 aa)
     
   
  0.943
At2g45070
Preprotein translocase Sec, Sec61-beta subunit protein; Necessary for protein translocation in the endoplasmic reticulum (82 aa)
     
 
  0.932
AT3G60540
Preprotein translocase Sec, Sec61-beta subunit protein; Necessary for protein translocation in the endoplasmic reticulum (81 aa)
     
 
  0.925
AT1G52600
Peptidase S24/S26A/S26B/S26C family protein; Its function is described as peptidase activity; Involved in proteolysis, signal peptide processing; Located in endoplasmic reticulum, plasma membrane, membrane; Expressed in 26 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Peptidase S24/S26A/S26B, conserved region (InterPro-IPR019759), Peptidase S26B, eukaryotic signal peptidase (InterPro-IPR001733), Peptidase S24/S26A/S26B/S26C (InterPro-IPR015927); BEST Arabidopsis thaliana protein match is- Peptidase S24/S26A/S26B/S26C family protein (TAIR- [...] (180 aa)
     
 
  0.919
AT4G24920.1
secE/sec61-gamma protein transport protein; Its function is described as P-P-bond-hydrolysis-driven protein transmembrane transporter activity; Involved in intracellular protein transport, protein transport, protein targeting; Located in membrane; Expressed in 23 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Protein translocase SEC61 complex gamma subunit (InterPro-IPR008158), Protein secE/sec61-gamma protein (InterPro-IPR001901); BEST Arabidopsis thaliana protein match is- secE/sec61-gamma protein transport protein (TAIR-AT5G50460.1); Ha [...] (69 aa)
     
   
  0.917
ATDAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. Possesses cell death-inhibiting activity; Belongs to the DAD/OST2 family (115 aa)
     
        0.912
AT3G15710
Peptidase S24/S26A/S26B/S26C family protein; Its function is described as peptidase activity; Involved in proteolysis, signal peptide processing; Located in endoplasmic reticulum, plasma membrane, membrane; Expressed in 26 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Peptidase S24/S26A/S26B, conserved region (InterPro-IPR019759), Peptidase S26B, eukaryotic signal peptidase (InterPro-IPR001733), Peptidase S24/S26A/S26B/S26C (InterPro-IPR015927); BEST Arabidopsis thaliana protein match is- Peptidase S24/S26A/S26B/S26C family protein (TAIR- [...] (180 aa)
     
 
  0.911
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein; Necessary for protein translocation in the endoplasmic reticulum (109 aa)
     
 
  0.910
AT1G19240
Uncharacterized protein At1g19240; Unknown protein; Has 24 Blast hits to 24 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (104 aa)
     
   
  0.907
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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