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AT1G27435 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27435" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27435Uncharacterized protein (81 aa)    
Predicted Functional Partners:
RPS28
Ribosomal protein S28 (64 aa)
     
        0.756
TIM8
Translocase inner membrane subunit 8; Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIM8-TIM13 complex mediates the import of some proteins while the predominant T [...] (77 aa)
     
        0.677
TOM6
Translocase of the outer mitochondrial membrane 6; A component of the complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins (54 aa)
     
        0.652
AT5G02610
60S ribosomal protein L35-4 (146 aa)
     
        0.651
AT3G44590
60S acidic ribosomal protein P2-4; Plays an important role in the elongation step of protein synthesis (111 aa)
     
        0.651
AT4G25890
60S acidic ribosomal protein P3-1; Plays an important role in the elongation step of protein synthesis (119 aa)
     
        0.649
NRPB12
DNA-directed RNA Polymerase II subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA- directed DNA methylation-dependent (RdDM) tr [...] (51 aa)
     
        0.632
RPS11-BETA
Ribosomal protein S11-beta (159 aa)
     
        0.616
AT3G16080
60S ribosomal protein L37-3; Binds to the 23S rRNA (95 aa)
     
        0.614
AT3G10090
40S ribosomal protein S28-1 (64 aa)
     
        0.600
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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