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AT1G27435 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27435" - Uncharacterized protein At1g27435/F17L21.30 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G27435Uncharacterized protein At1g27435/F17L21.30; Unknown protein; Has 16 Blast hits to 16 proteins in 8 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (81 aa)    
Predicted Functional Partners:
RPS28
Encodes a putative ribosomal protein S28 (64 aa)
     
        0.680
TOM6
Mitochondrial import receptor subunit TOM6 homolog; A component of the complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins; Belongs to the Tom6 family (54 aa)
     
        0.527
AT4G25890
60S acidic ribosomal protein family; Plays an important role in the elongation step of protein synthesis (119 aa)
     
        0.522
AT5G02610
Ribosomal L29 family protein ; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L29 (InterPro-IPR001854); BEST Arabidopsis thaliana protein match is- Ribosomal L29 family protein (TAIR-AT3G09500.1) (146 aa)
     
        0.499
AT3G44590
60S acidic ribosomal protein family; Plays an important role in the elongation step of protein synthesis (111 aa)
     
        0.499
TIM8
Mitochondrial import inner membrane translocase subunit TIM8; Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIM8-TIM13 complex mediates the import of some proteins [...] (77 aa)
     
        0.491
NRPB12
DNA-directed RNA polymerases II, IV and V subunit 12; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA- directed DNA methylation-depende [...] (51 aa)
     
        0.472
AT3G16080
Zinc-binding ribosomal protein family protein; Binds to the 23S rRNA (95 aa)
     
        0.469
AT3G10090.1
Nucleic acid-binding, OB-fold-like protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Nucleic acid-binding, OB-fold-like (InterPro-IPR016027), Nucleic acid-binding, OB-fold (InterPro-IPR012340), Ribosomal protein S28e (InterPro-IPR000289); BEST Arabidopsis thaliana protein match is- Nucleic acid-binding, OB-fold-like protein [...] (64 aa)
     
        0.459
TIM10
Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus (107 aa)
     
        0.459
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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