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AT1G27470 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27470" - Transducin family protein / WD-40 repeat family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27470Transducin family protein / WD-40 repeat family protein (810 aa)    
Predicted Functional Partners:
SWA1
SLOW WALKER1; Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed-15634699, PubMed-15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed-15980260) (530 aa)
     
  0.999
AT5G11240
transducin/WD40 domain-containing protein (615 aa)
     
  0.999
PWP2
Periodic tryptophan protein 2 (900 aa)
     
  0.999
AT1G15420
Uncharacterized protein (278 aa)
     
  0.999
AT3G06530
ARM repeat superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (2199 aa)
     
  0.999
AT3G10530
transducin/WD40 domain-containing protein (536 aa)
     
  0.999
AT4G28200
Uncharacterized protein (648 aa)
     
  0.999
AT4G04940
transducin/WD40 domain-containing protein (910 aa)
     
  0.999
TOZ
TORMOZEMBRYO DEFECTIVE (876 aa)
     
  0.999
AT3G21540
transducin/WD40 domain-containing protein (955 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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