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AT1G27490 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27490" - F-box and associated interaction domain-containing protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27490F-box and associated interaction domain-containing protein (164 aa)    
Predicted Functional Partners:
AT3G28410
F-box domain-containing protein (465 aa)
     
   
  0.875
AT4G11590
F-box protein; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (397 aa)
           
  0.869
AT3G49030
Putative F-box/FBD/LRR-repeat protein (443 aa)
           
  0.869
AT1G70590
F-box protein (351 aa)
           
  0.869
AT1G67340
HCP-like superfamily protein with MYND-type zinc finger; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (379 aa)
           
  0.862
AT5G02700
Putative F-box/LRR-repeat protein (456 aa)
           
  0.808
AT3G16740
F-box/kelch-repeat protein; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (391 aa)
           
  0.808
ARP8
Actin-related protein 8 (471 aa)
           
  0.780
AT1G51290
Putative F-box only protein 10 (377 aa)
           
  0.780
P58IPK
Homolog of mamallian P58IPK; Plays an important positive role in viral symptom development and is required for viral multiplication and pathogenesis (482 aa)
           
  0.709
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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