STRINGSTRING
AT1G27710 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27710" - Glycine-rich protein family in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27710Glycine-rich protein family (212 aa)    
Predicted Functional Partners:
AT5G09780
B3 domain-containing protein REM23 (308 aa)
     
   
  0.821
AT5G12000
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (701 aa)
           
  0.805
PI4KG1
Phosphoinositide 4-kinase gamma 1; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (561 aa)
           
  0.804
GRP18
Glycine-rich protein 18 (228 aa)
     
   
  0.786
ATA27
Beta-glucosidase 20 (535 aa)
     
   
  0.746
ATA20
Anther 20 (416 aa)
     
   
  0.704
A7
ANTHER 7 (180 aa)
     
   
  0.677
REM22
REPRODUCTIVE MERISTEM 22 (302 aa)
           
  0.670
MYB80
Myb domain protein 103 (320 aa)
     
   
  0.664
AT5G25475
AP2/B3 domain-containing protein (324 aa)
           
  0.634
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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