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AT1G27750 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27750" - Uncharacterized protein At1g27750 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G27750Uncharacterized protein At1g27750; Nucleic acid binding; Its function is described as nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in cultured cell; Contains the following InterPro domains- Spen paralogue and orthologue SPOC, C-terminal (InterPro-IPR012921), RNA recognition motif, RNP-1 (InterPro-IPR000504); Has 48205 Blast hits to 29216 proteins in 1385 species- Archae - 84; Bacteria - 5862; Metazoa - 21406; Fungi - 6566; Plants - 7294; Viruses - 1352; Other Eukaryotes - 5641 (source- NCBI BLink) (1075 aa)    
Predicted Functional Partners:
AT1G27752
Ubiquitin system component Cue protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- Ubiquitin system component Cue (InterPro-IPR003892); Has 423 Blast hits to 397 proteins in 140 species- Archae - 0; Bacteria - 35; Metazoa - 153; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 70 (source- NCBI BLink) (873 aa)
 
            0.547
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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