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AT1G27850 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27850" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27850Uncharacterized protein (1148 aa)    
Predicted Functional Partners:
AT1G21610
Wound-responsive family protein (685 aa)
     
   
  0.744
AT4G12010
TIR-NBS-LRR class disease resistance protein (1219 aa)
     
   
  0.701
AT1G27880
ATP-dependent DNA helicase Q-like 5; 3’-5’ DNA helicase that may play a role in the repair of DNA (911 aa)
           
  0.606
AT5G66900
CC-NBS-LRR class disease resistance protein; Probable disease resistance protein (809 aa)
           
  0.604
emb1967
Embryo defective 1967 (702 aa)
     
   
  0.603
AT5G47700
60S acidic ribosomal protein P1-3; Plays an important role in the elongation step of protein synthesis (113 aa)
           
  0.601
AT2G01480
O-fucosyltransferase family protein (567 aa)
     
   
  0.586
AT3G14470
Putative disease resistance RPP13-like protein 1; Potential disease resistance protein (1054 aa)
           
  0.493
EFS
EARLY FLOWERING IN SHORT DAYS; Histone methyltransferase involved in di and tri- methylation of ’Lys-36’ of histone H3 (H3K36me2 and H3K36me3). Binds to H3 already mono- or di-methylated on ’Lys-4’(H3K4me1 or H3K4me2), but not to H3K4me3. H3K4me and H3K36me represent specific tags for epigenetic transcriptional activation. Regulates positively FLC transcription to prevent early flowering transition. Required for flowering transition in response to vernalization and for the maintenance of FLC expression in late embryos, but dispensable for the initial reactivation in early embryos durin [...] (1805 aa)
     
   
  0.478
AT3G14460
LRR and NB-ARC domain-containing disease resistance protein; Potential disease resistance protein (1424 aa)
     
   
  0.476
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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