STRINGSTRING
AT1G27860 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27860" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27860Uncharacterized protein (289 aa)    
Predicted Functional Partners:
AT5G09210
GC-rich sequence DNA-binding factor-like protein (603 aa)
     
        0.438
AT4G04460
Phytepsin; Involved in the processing and degradation of storage proteins (508 aa)
     
        0.438
AT3G56320
PAP/OAS1 substrate-binding domain superfamily (603 aa)
     
        0.438
MYB118
Myb domain protein 118 (437 aa)
     
        0.438
UGT84B1
UDP-glucosyl transferase 84B1; Possesses low quercetin 7-O-glucosyltransferase activity in vitro (456 aa)
     
        0.438
AT1G69860
Nitrate transporter 1 (555 aa)
     
        0.438
AT1G23770
F-box family protein (350 aa)
     
        0.438
TPS2
Trehalose-phosphatase/synthase 2 (821 aa)
     
        0.438
GA3
GA requiring 3; Catalyzes three successive oxidations of the 4-methyl group of ent-kaurene giving kaurenoic acid, a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development (509 aa)
     
        0.437
AT5G07260
START lipid-binding domain-containing protein (541 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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