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AT1G27870 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27870" - Polynucleotidyl transferase, ribonuclease H-like superfamily protein in Arabidopsis thaliana
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
AT1G27870Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Its function is described as nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Polynucleotidyl transferase, ribonuclease H fold (InterPro-IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro-IPR015706); BEST Arabidopsis thaliana protein match is- glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR-AT2G33160.1); Has 396 Blast hits to 396 proteins in 20 species [...] (213 aa)
Sorry, there are no predicted associations at the current settings.
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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