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AT1G27900 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G27900" - RNA helicase family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
AT1G27900RNA helicase family protein; May be involved in pre-mRNA splicing (700 aa)    
Predicted Functional Partners:
AT1G10580
pre-mRNA-processing factor 17 (573 aa)
     
 
  0.967
CDC5
Cell division cycle 5; Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Possesses a sequence specific DNA sequence ’CTCAGCG’ binding activity. Involved in mRNA splicing and cell cycle control. May also play a role in the response to DNA damage (844 aa)
     
 
  0.961
MAC3B
MOS4-associated complex 3B; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (525 aa)
     
 
  0.958
MAC3A
MOS4-associated complex 3A; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (523 aa)
     
 
  0.952
AT4G21110
G10 family protein (145 aa)
       
 
  0.929
AT3G18790
pre-mRNA-splicing factor ISY1 (300 aa)
     
 
  0.918
AT5G28740
pre-mRNA-splicing factor SYF1 (917 aa)
     
 
  0.877
AT5G41770
Putative crooked neck protein / cell cycle protein (705 aa)
     
 
  0.860
AT4G32700
DNA polymerase theta subunit; Required for regulated cell division and differentiation in meristems and embryos, thus modulating adaxial-abaxial polarity. Regulates the progression of cell cycle and DNA replication (e.g. G2/M progression and intrachromosomal recombination) and the expression of genes during development, especially genes nearby the Helitron transposons (2154 aa)
   
 
  0.839
UAP56b
Homolog of human UAP56 b (486 aa)
     
 
  0.835
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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