STRINGSTRING
AT1G28007 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28007" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28007Uncharacterized protein (61 aa)    
Predicted Functional Partners:
AT5G63952
Uncharacterized protein (50 aa)
     
        0.438
AT5G36820.1
F-box protein (410 aa)
     
        0.438
AT5G36730
F-box protein (410 aa)
     
        0.438
AT5G36300
Tetracopeptide epeat-containing protein-like protein (284 aa)
     
        0.438
AT3G42870
Uncharacterized protein (312 aa)
     
        0.438
AT3G30391
Uncharacterized protein (34 aa)
     
        0.438
AT3G27800
Uncharacterized protein (58 aa)
     
        0.438
AT2G07200
Cysteine proteinase-like protein (151 aa)
     
        0.438
AT2G02550
PIN domain-containing protein (200 aa)
     
        0.438
AT1G53366
Uncharacterized protein (45 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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