STRINGSTRING
BBX13 protein (Arabidopsis thaliana) - STRING interaction network
"BBX13" - B-box domain protein 13 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBX13B-box domain protein 13 (433 aa)    
Predicted Functional Partners:
TOC1
TIMING OF CAB EXPRESSION 1; Controls photoperiodic flowering response. Component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock. Positive regulator of CCA1 and LHY expression (618 aa)
     
   
  0.854
NF-YC1
Nuclear factor Y, subunit C1; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (234 aa)
       
 
  0.843
NF-YB2
Nuclear factor Y, subunit B2; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (190 aa)
       
 
  0.809
NF-YB1
Nuclear factor Y, subunit B1 (164 aa)
       
 
  0.788
NF-YB10
Nuclear factor Y, subunit B10; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (176 aa)
       
 
  0.757
NF-YC5
Nuclear factor Y, subunit C5; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (186 aa)
       
 
  0.757
NF-YC7
Nuclear factor Y, subunit C7; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (212 aa)
       
 
  0.737
ASML2
Activator of spomin--LUC2 (251 aa)
     
   
  0.685
TAG1
Diacylglycerol O-acyltransferase 1; Major enzyme for oil accumulation in seeds. Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA. Can use palmitoyl-CoA and oleoyl-CoA as substrates. Has complementary functions with PDAT1 that are essential for triacylglycerol synthesis and normal development of both seeds and pollen (520 aa)
     
        0.684
NF-YB7
Nuclear factor Y, subunit B7; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (215 aa)
           
  0.674
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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