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BBX13 protein (Arabidopsis thaliana) - STRING interaction network
"BBX13" - B-box type zinc finger protein with CCT domain in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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BBX13B-box type zinc finger protein with CCT domain; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding; Involved in regulation of transcription; Located in intracellular; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- CCT domain (InterPro-IPR010402), Zinc finger, B-box (InterPro-IPR000315); BEST Arabidopsis thaliana protein match is- B-box type zinc finger protein with CCT domain (TAIR-AT2G33500.2); Has 3090 Blast hits to 2261 proteins in 129 species- Archae - 2; Bacteria [...] (433 aa)    
Predicted Functional Partners:
TOC1
CCT motif -containing response regulator protein; Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization (618 aa)
     
   
  0.792
AT1G59740
Major facilitator superfamily protein; Its function is described as transporter activity; Involved in oligopeptide transport, response to nematode; Located in plasma membrane, membrane; Expressed in 19 plant structures; Expressed during 10 growth stages; Contains the following InterPro domains- PTR2 family proton/oligopeptide symporter, conserved site (InterPro-IPR018456), Oligopeptide transporter (InterPro-IPR000109), Major facilitator superfamily, general substrate transporter (InterPro-IPR016196); BEST Arabidopsis thaliana protein match is- Major facilitator superfamily protein (TAI [...] (591 aa)
           
  0.691
AT3G59580
Plant regulator RWP-RK family protein; Probable transcription factor (894 aa)
           
  0.643
AT5G46710
PLATZ transcription factor family protein; Contains the following InterPro domains- Protein of unknown function DUF597 (InterPro-IPR006734); BEST Arabidopsis thaliana protein match is- PLATZ transcription factor family protein (TAIR-AT4G17900.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (226 aa)
           
  0.626
BBX8
B-box type zinc finger protein with CCT domain; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding; Located in plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- CCT domain (InterPro-IPR010402), Zinc finger, B-box (InterPro-IPR000315); BEST Arabidopsis thaliana protein match is- CONSTANS-like 9 (TAIR-AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Euka [...] (373 aa)
     
   
0.610
AT1G76590
PLATZ transcription factor family protein; Contains the following InterPro domains- Protein of unknown function DUF597 (InterPro-IPR006734); BEST Arabidopsis thaliana protein match is- PLATZ transcription factor family protein (TAIR-AT1G21000.1); Has 404 Blast hits to 404 proteins in 27 species- Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 402; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (245 aa)
     
   
  0.598
NF-YB1
Nuclear factor Y, subunit B1; Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance (164 aa)
       
 
  0.575
TAG1
Membrane bound O-acyl transferase (MBOAT) family protein; Major contributor to triacylglycerol (TAG) synthesis and oil accumulation in seeds. Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA. Can use palmitoyl-CoA and oleoyl-CoA as substrates. Can use oleoyl-CoA and linoleoyl-CoA as substrates. Has substrate preference for oleoyl-CoA compared to linoleoyl-CoA. Has complementary functions with PDAT1 that are essential for triacylglycerol synthesis and normal development of both seeds and pollen (520 aa)
     
        0.570
LKP2
LOV KELCH protein 2; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light-regulated protein degradation of critical clock components by targeting them to the proteasome complex. The SCF(ADO2) E3 ubiquitin ligase complex is involved in the regulation of circadian clock-dependent processes including the transition to flowering time, hypocotyl elongation, cotyledons and leaf movement rhythms. APRR1/TOC1 and APRR5 seem to be substrates of the SCF(AD [...] (611 aa)
       
      0.564
AT1G12890
Ethylene-responsive transcription factor ERF088; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (219 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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