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At1g28200 protein (Arabidopsis thaliana) - STRING interaction network
"At1g28200" - VirF-interacting protein FIP1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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At1g28200VirF-interacting protein FIP1 (259 aa)    
Predicted Functional Partners:
MTM2
Phosphatidylinositol-3-phosphatase myotubularin-2; Phosphatase with phosphoinositide 3’-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P); participates in pathway(s) that transfer gene regulatory signals to the nucleus; Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily (833 aa)
           
  0.809
GERM2
Germin-like protein subfamily 1 member 20; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (222 aa)
           
  0.768
JAR1
Auxin-responsive GH3 family protein; Catalyzes the synthesis of jasmonates-amino acid conjugates by adenylation; can use Ile and, in vitro at least, Val, Leu and Phe as conjugating amino acids on jasmonic acid (JA) and 9,10-dihydro-JA substrates, and to a lower extent, on 3-oxo-2- (2Z-pentenyl)-cyclopentane-1-butyric acid (OPC-4) and 12-hydroxy- JA (12-OH-JA). Can synthesize adenosine 5-tetraphosphate in vitro. Required for the JA-mediated signaling pathway that regulates many developmental and defense mechanisms, including growth root inhibition, vegetative storage proteins (VSPs) acc [...] (586 aa)
       
      0.765
AT2G22345
Encodes a defensin-like (DEFL) family protein; Belongs to the DEFL family (61 aa)
           
  0.695
MCM6
Minichromosome maintenance (MCM2/3/5) family protein; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells (831 aa)
           
  0.668
AFH1
Formin-like protein 1; Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event; Belongs to the formin-like family. Class-I subfamily (1051 aa)
       
      0.655
GSO1
LRR receptor-like serine/threonine-protein kinase GSO1; Together with GSO2, receptor-like serine/threonine- kinase required during the development of the epidermal surface in embryos and cotyledons. In coordination with GSO2, regulates root growth through control of cell division and cell fate specification. Controls seedling root growth by modulating sucrose response after germination. Receptor of the peptide hormones CIF1 and CIF2 required for contiguous Casparian strip diffusion barrier formation in roots. Required for localizing CASP proteins into the Casparian strip following an u [...] (1249 aa)
           
  0.646
VAD1
Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system (598 aa)
           
  0.641
GER3
Germin-like protein subfamily 3 member 3; Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation (211 aa)
           
  0.625
At1g72610
Germin-like protein subfamily 3 member 1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (208 aa)
           
  0.616
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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