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AT1G28306 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28306" - Plant self-incompatibility protein S1 family in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28306Plant self-incompatibility protein S1 family (137 aa)    
Predicted Functional Partners:
ABCA12
Member of ATH subfamily (888 aa)
     
        0.438
ABCA11
Member of ATH subfamily (919 aa)
     
        0.438
AT5G60010
Putative respiratory burst oxidase-H; Calcium-dependent NADPH oxidase that generates superoxide (886 aa)
     
        0.438
ACT4
Actin 4; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins (377 aa)
     
        0.438
AT5G58880
Uncharacterized protein (1088 aa)
     
        0.438
AT5G51030
NAD(P)-binding Rossmann-fold superfamily protein (314 aa)
     
        0.438
AT5G48270
Uncharacterized protein (322 aa)
     
        0.438
PUB15
Plant U-Box 15; Functions as an E3 ubiquitin ligase (660 aa)
     
        0.438
AT5G38760
Late embryogenesis abundant protein (LEA) family protein (67 aa)
     
        0.438
AT5G36260
Aspartyl protease family protein (482 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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