STRINGSTRING
AT1G28327 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28327" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28327Uncharacterized protein (274 aa)    
Predicted Functional Partners:
AT3G44810
F-box protein (448 aa)
     
        0.446
AT5G52610
Putative F-box protein (351 aa)
     
        0.438
AT5G42640
Zinc finger (C2H2 type) family protein (300 aa)
     
        0.438
EXPA21
Expansin A21; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity) (262 aa)
     
        0.438
AT5G25410
Uncharacterized protein (369 aa)
     
        0.438
AT4G33840
Glycosyl hydrolase family 10 protein (576 aa)
     
        0.438
AT4G33830
Glycosyl hydrolase family 10 protein (576 aa)
     
        0.438
AT4G32380
Pectin lyase-like superfamily protein (354 aa)
     
        0.438
AT4G32378
Uncharacterized protein (36 aa)
     
        0.438
LCR21
Defensin-like protein 156 (82 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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