STRINGSTRING
AT1G28530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28530" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28530Uncharacterized protein (614 aa)    
Predicted Functional Partners:
AT1G28540
Uncharacterized protein (103 aa)
           
  0.861
AT1G65200
Ubiquitin carboxyl-terminal hydrolase-related protein (1101 aa)
           
  0.803
SHOC1
SHORTAGE IN CHIASMATA 1 (1594 aa)
           
  0.670
EMB269
EMBRYO DEFECTIVE 269; GTP-binding protein involved in membrane biogenesis and protein synthesis in chloroplast. Functions in the biogenesis of thylakoid membrane and plastid ribosome during chloroplast development. May be involved in the vesicular traffic between the chloroplast inner envelope membrane and thylakoids. Possesses GTPase activity in vitro (681 aa)
     
   
  0.659
HVA22B
HVA22 homologue B (167 aa)
           
  0.630
ACR1
ACT domain repeat 1; May bind amino acids (477 aa)
           
  0.600
GDC1
Ankyrin repeat family protein; Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway (175 aa)
           
  0.557
AT4G01150
Uncharacterized protein; Determines thylakoid architecture by inducing membrane curvature (164 aa)
           
  0.551
PTAC14
Plastid transcriptionally active 14; Essential for chloroplast development, especially for thylakoid formation. Involved in plastid gene expression, probably by maintaining plastid-encoded RNA polymerase (PEP) activity (483 aa)
     
   
  0.495
ATK1
Kinesin 1; Kinesin that supports microtubule movement in an ATP- dependent manner and has a minus-end directed polarity. Plays a crucial role in spindle morphogenesis in male Arabidopsis meiosis. In mitosis, is required for normal microtubule accumulation at the spindle poles during prophase and may play a role in spindle assembly during prometaphase (793 aa)
     
   
  0.490
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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