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AT1G28590 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28590" - GDSL esterase/lipase in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28590GDSL esterase/lipase (403 aa)    
Predicted Functional Partners:
AT3G24200
Ubiquinone biosynthesis monooxygenase Coq6 (507 aa)
           
  0.843
CYP705A6
Member of CYP705A (442 aa)
           
  0.843
AT1G50390
pfkB-like carbohydrate kinase family protein (146 aa)
           
  0.843
AT2G39750
Putative methyltransferase PMT11 (694 aa)
           
  0.739
sks3
SKU5 similar 3 (621 aa)
           
  0.737
AT5G08300
Succinyl-CoA ligase, alpha subunit (347 aa)
           
  0.678
AT4G39780
Ethylene-responsive transcription factor ERF060; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (272 aa)
           
  0.638
AT4G24780
Putative pectate lyase 18 (408 aa)
           
  0.638
AT3G62590
Lipase class 3 family protein (649 aa)
           
  0.632
AT3G26380
Melibiase family protein (647 aa)
           
  0.632
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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