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AT1G29020 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29020" - Calcium-binding EF-hand family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G29020Calcium-binding EF-hand family protein; Its function is described as calcium ion binding; Located in endomembrane system; Expressed in root, callus; Contains the following InterPro domains- EF-Hand 1, calcium-binding site (InterPro-IPR018247), EF-HAND 2 (InterPro-IPR018249), EF-hand-like domain (InterPro-IPR011992), Calcium-binding EF-hand (InterPro-IPR002048); BEST Arabidopsis thaliana protein match is- Calcium-binding EF-hand family protein (TAIR-AT1G29025.1); Has 483 Blast hits to 315 proteins in 72 species- Archae - 8; Bacteria - 1; Metazoa - 61; Fungi - 5; Plants - 330; Viruses - [...] (564 aa)    
Predicted Functional Partners:
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional activator. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Mediates embryo axis formation and vascular tissues differentiation. Functionally redundant with ARF7. May be necessary to counteract AMP1 activity (902 aa)
           
  0.698
BCB
Blue-copper-binding protein; Probably acts as an electron carrier (196 aa)
           
  0.561
AT2G28960
Probable LRR receptor-like serine/threonine-protein kinase At2g28960; Leucine-rich repeat protein kinase family protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in endomembrane system; Expressed in 6 plant structures; Expressed during 4 anthesis, C globular stage; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, catalytic domain (InterPro-IPR000719), Serine/threonine-protein kinase-li [...] (880 aa)
     
        0.435
AT3G01190
Peroxidase superfamily protein; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (321 aa)
     
        0.428
AT5G43520
Cysteine/Histidine-rich C1 domain family protein; Contains the following InterPro domains- DC1 (InterPro-IPR004146), C1-like (InterPro-IPR011424); BEST Arabidopsis thaliana protein match is- Cysteine/Histidine-rich C1 domain family protein (TAIR-AT2G44380.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (250 aa)
     
        0.426
MEE39
Probable LRR receptor-like serine/threonine-protein kinase MEE39; Receptor-like serine/threonine-kinase required during the endosperm development in seeds; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (878 aa)
     
        0.424
AT1G29025
Calcium-binding EF-hand family protein; Its function is described as calcium ion binding; Located in endomembrane system; Contains the following InterPro domains- EF-Hand 1, calcium-binding site (InterPro-IPR018247), EF-HAND 2 (InterPro-IPR018249), Calcium-binding EF-hand (InterPro-IPR002048), EF-hand-like domain (InterPro-IPR011992); BEST Arabidopsis thaliana protein match is- Calcium-binding EF-hand family protein (TAIR-AT1G29020.1) (578 aa)
     
     
0.424
AT1G26250
Proline-rich extensin-like family protein; Its function is described as structural constituent of cell wall; Involved in plant-type cell wall organization; Located in endomembrane system; Contains the following InterPro domains- Extensin-like repeat (InterPro-IPR006706); BEST Arabidopsis thaliana protein match is- Proline-rich extensin-like family protein (TAIR-AT4G08370.1); Has 289174 Blast hits to 44674 proteins in 1767 species- Archae - 806; Bacteria - 48932; Metazoa - 103337; Fungi - 38580; Plants - 50919; Viruses - 7655; Other Eukaryotes - 38945 (source- NCBI BLink) (443 aa)
     
        0.424
GLP4
Germin-like protein subfamily T member 1; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (220 aa)
     
        0.424
AT5G57625
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system, extracellular region; Contains the following InterPro domains- Allergen V5/Tpx-1 related, conserved site (InterPro-IPR018244), Allergen V5/Tpx-1 related (InterPro-IPR001283), Ves allergen (InterPro-IPR002413), SCP-like extracellular (InterPro-IPR014044); BEST Arabidopsis thaliana protein match is- CAP (Cysteine-rich secretory proteins, Antigen 5, and Pat [...] (207 aa)
     
        0.422
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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