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AT1G29220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29220" - Transcriptional regulator family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G29220Transcriptional regulator family protein (363 aa)    
Predicted Functional Partners:
AT5G63370
Cell division cycle 2-like protein; Cyclin-dependent kinase involved in pre-mRNA splicing. Required for the correct splicing of the sixth intron of CALS5 pre-mRNA. May stabilize the binding of U1 snRNP to this rare type of intron with a GC 5’SS. Involved in chromosome pairing and is required for the completion of synapsis in male meiocytes at high ambient temperatures (612 aa)
     
      0.893
AT2G32600
Splicing factor 3A subunit 2 (277 aa)
     
      0.673
DDB1B
DNA damage-binding protein 1b; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness (By similarity). Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB) (By similarity) (1088 aa)
     
      0.671
DDB1A
DNA damage-binding protein 1a; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis- promoting factors such as HY5, HYH and LAF1. Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB). Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protei [...] (1088 aa)
     
      0.669
AT1G72430
SAUR-like auxin-responsive protein family (119 aa)
           
  0.636
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
     
      0.574
CYP82C4
Cytochrome P450, family 82, subfamily C, polypeptide 4; Can hydroxylate 8-methoxypsoralen to form 5-hydroxy-8- methoxypsoralen in vivo and in vitro. Involved in the early iron deficiency response, possibly through an IDE1-like mediated pathway (524 aa)
           
  0.557
TDT
Tonoplast dicarboxylate transporter; Putative carrier protein indirectly involved in the uptake of malate and fumarate to the vacuole, probably by regulating the energization across the tonoplast. Uptake of malate to vacuoles is inhibited by citrate and by the uncoupler carbonyl- cyanide m-chlorophenylhydrazone, but seems to be not affected by sodium. Critical for pH homeostasis (540 aa)
           
  0.555
ERF71
Ethylene response factor 71; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (171 aa)
           
  0.479
DRT111
DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111; Seems to be involved in the resistance to UV light and chemical DNA-damaging agents (PubMed-8479917). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed-25267732) (387 aa)
     
      0.451
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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