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AT1G29310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29310" - SecY protein transport family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29310SecY protein transport family protein (475 aa)    
Predicted Functional Partners:
AT3G60540
Preprotein translocase Sec, Sec61-beta subunit protein (81 aa)
     
  0.999
At2g45070
Sec61 Beta Subunit; Necessary for protein translocation in the endoplasmic reticulum (82 aa)
     
  0.999
AT5G60460
Protein transport protein SEC61 subunit beta (109 aa)
     
  0.998
AT3G48570
secE/sec61-gamma protein transport protein; Necessary for protein translocation in the endoplasmic reticulum (69 aa)
     
  0.998
ATERDJ2B
J domain protein localized in ER membrane; Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane (661 aa)
     
  0.997
ATERDJ2A
Translocation protein SEC63; Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane (687 aa)
     
  0.997
AT5G50460.1
secE/sec61-gamma protein transport protein; Necessary for protein translocation in the endoplasmic reticulum (69 aa)
     
  0.995
DGL1
DEFECTIVE GLYCOSYLATION; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (437 aa)
     
 
  0.991
AT5G23535
KOW domain-containing protein (159 aa)
   
 
  0.989
AT5G67510
60S ribosomal protein L26-2 (146 aa)
   
 
  0.988
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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