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AT1G29320 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29320" - WD40 domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29320WD40 domain-containing protein (468 aa)    
Predicted Functional Partners:
AT3G15460
Ribosomal RNA processing Brix domain protein (315 aa)
     
      0.998
AT5G15550
transducin/WD40 domain-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (433 aa)
     
 
  0.998
AT1G52930
Ribosomal RNA processing Brix domain protein (320 aa)
     
      0.998
IMP4
Ribosomal RNA processing Brix domain protein (294 aa)
     
      0.998
AT2G18220
Noc2p family (764 aa)
     
      0.997
At3g55510
REBELOTE (594 aa)
     
      0.997
AT2G40360
transducin/WD-40 repeat-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (753 aa)
     
 
  0.996
NSN1
Nucleostemin-like 1; Involved in the differentiation of epidermal cells, probably via the regulation of the expression of meristem-related genes (e.g. CLV3, STM, KNAT1, CUC2 and AG) and of leaf polarity- related genes (e.g. YAB5, FIL, AS2, PHB and PHV) (PubMed-22058024, PubMed-22357616). May play a role in regulating cellular proliferation (By similarity). Necessary for flower development, probably by preventing apical dominance through the down- regulation of AG expression (PubMed-22357616). Required for embryogenesis, leaf and cotyledon development, as well as for leaf polarity estab [...] (582 aa)
     
 
  0.996
AT1G25260
Ribosomal protein L10 family protein (235 aa)
     
 
  0.996
MEE49
Maternal effect embryo arrest 49 (343 aa)
     
      0.995
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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