STRINGSTRING
AT1G29530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29530" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29530Uncharacterized protein (236 aa)    
Predicted Functional Partners:
AT1G29520
AWPM19-like protein (158 aa)
           
  0.848
AT1G02475
SRPBCC ligand-binding domain-containing protein (219 aa)
     
   
  0.828
AT5G10690
Pentatricopeptide repeat-containing protein (580 aa)
     
   
  0.822
AT3G06690
acyl-CoA dehydrogenase domain-containing protein (187 aa)
           
  0.810
AT2G32340
TraB family protein (360 aa)
           
  0.810
AT1G74875
Uncharacterized protein (243 aa)
           
  0.810
CPuORF18
Conserved peptide upstream open reading frame 18 (68 aa)
           
  0.809
CPuORF17
Uncharacterized protein (55 aa)
           
  0.809
AT1G55800
Uncharacterized protein (314 aa)
           
  0.740
AT5G66450
Lipid phosphate phosphatase epsilon 2; Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a secondary role as PAP in plastids (286 aa)
           
  0.739
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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