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AT1G29570 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29570" - Zinc finger C-x8-C-x5-C-x3-H type family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29570Zinc finger C-x8-C-x5-C-x3-H type family protein (321 aa)    
Predicted Functional Partners:
AT5G60080
Protein kinase family protein (377 aa)
     
      0.439
AT3G58280
Phospholipase-like protein (PEARLI 4) with TRAF-like domain (243 aa)
     
        0.438
AT2G29820
Putative F-box/kelch-repeat protein (388 aa)
     
        0.436
SK19
SKP1-like 19; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (200 aa)
     
        0.436
AT2G35080
Nucleotide binding;ATP binding;aminoacyl-tRNA ligases (239 aa)
     
        0.435
MGT5
Magnesium transport 5; Magnesium transporter that mediates the influx/efflux of magnesium in a concentration-dependent manner. Plays a crucial role in male gametophyte development and male fertility (408 aa)
     
        0.430
AT5G46380
Uncharacterized protein (607 aa)
     
        0.429
AT1G24220
Paired amphipathic helix repeat-containing protein (744 aa)
     
        0.424
AT3G58440
TRAF-like family protein (601 aa)
     
        0.423
AT5G60090
Protein kinase family protein (398 aa)
     
      0.410
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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