STRINGSTRING
AT1G29680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29680" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29680Uncharacterized protein (237 aa)    
Predicted Functional Partners:
AT1G05510
Uncharacterized protein (241 aa)
   
   
0.927
AT2G31985
Uncharacterized protein (241 aa)
   
   
0.870
TCP14
Transcription factor TCP14 (489 aa)
       
      0.588
SCPL19
Serine carboxypeptidase-like 19; Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylcholine also known as sinapine. Able to convert in vitro benzoylglucose into benzoylcholine (465 aa)
     
        0.463
AT4G31830
Uncharacterized protein (100 aa)
     
        0.462
AT5G44310
Late embryogenesis abundant domain-containing protein (331 aa)
     
        0.456
AT5G45690
Uncharacterized protein (247 aa)
   
     
0.453
TIP3;1
Aquaporin TIP3-1; Water channel required to facilitate the transport of water from the vacuolar compartment to the cytoplasm (268 aa)
     
        0.446
ATPXG2
Peroxygenase 2; Calcium-binding peroxygenase involved in the degradation of storage lipid in oil bodies. May be involved in the interaction between oil bodies and vacuoles during seed germination and in the oxylipin signaling pathways and plant defense responses. Can catalyze sulfoxidation of thiobenzamide, hydroxylation of aniline and epoxidation of oleic acid (243 aa)
     
        0.444
AtLEA4-1
Late Embryogenesis Abundant 4-1 (134 aa)
     
        0.443
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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