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AT1G29700 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29700" - Metallo-beta-lactamase domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29700Metallo-beta-lactamase domain-containing protein (350 aa)    
Predicted Functional Partners:
AT2G04039
Uncharacterized protein (206 aa)
     
        0.661
HCF244
High chlorophyll fluorescence phenotype 244 (395 aa)
   
        0.650
AT2G43945
Uncharacterized protein (289 aa)
   
        0.639
PSB28
Similar to PsbW subunit of photosystem II (198 aa)
   
        0.631
GTB1
Global transcription factor group B1 (1647 aa)
       
      0.627
AT1G63210
Transcription elongation factor SPT6 (1197 aa)
       
      0.627
AT1G32220
NAD(P)-binding Rossmann-fold-containing protein (296 aa)
   
        0.620
PGRL1A
PGR5-like protein 1A; Ferredoxin-plastoquinone reductase involved in cyclic electron flow (CEF) around photosystem I. The homodimer is probably not involved in CEF (324 aa)
     
        0.620
HCF173
High chlorophyll fluorescence phenotype 173 (598 aa)
   
        0.610
AT1G65230
Uncharacterized protein (286 aa)
     
        0.606
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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