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AT1G29965 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29965" - Ribosomal protein L18ae/LX family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29965Ribosomal protein L18ae/LX family protein (178 aa)    
Predicted Functional Partners:
AT5G61170
40S ribosomal protein S19-3 (143 aa)
   
 
  0.999
AT5G15520
40S ribosomal protein S19-2 (143 aa)
   
 
  0.999
AT5G60670
60S ribosomal protein L12-3; Binds directly to 26S ribosomal RNA (166 aa)
   
 
  0.999
AT5G56710
60S ribosomal protein L31-3 (119 aa)
   
 
  0.999
AT4G26230
60S ribosomal protein L31-2 (119 aa)
   
 
  0.999
AT3G02080
40S ribosomal protein S19-1 (143 aa)
   
 
  0.999
RPS6A
Ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (250 aa)
     
 
  0.999
AT2G20450
Ribosomal protein L14 (134 aa)
     
 
  0.999
At5g47320
Ribosomal protein S19; The RNA-binding domain found in RPS19 may functionally replaces the missing mitochondrial RPS13 (212 aa)
     
 
  0.999
AT3G53430
60S ribosomal protein L12-2; Binds directly to 26S ribosomal RNA (166 aa)
   
 
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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