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RPL18AA protein (Arabidopsis thaliana) - STRING interaction network
"RPL18AA" - 60S ribosomal protein L18A-1 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RPL18AA60S ribosomal protein L18A-1 (RPL18AA); Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L18ae/LX (InterPro-IPR021138), Ribosomal protein L18ae (InterPro-IPR002670); BEST Arabidopsis thaliana protein match is- Ribosomal protein L18ae/LX family protein (TAIR-AT1G29965.1); Has 869 Blast hits to 867 proteins in 280 species- Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 155; Plants - 2 [...] (312 aa)    
Predicted Functional Partners:
AT3G60245
Zinc-binding ribosomal protein family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein, zinc-binding domain (InterPro-IPR011332), Ribosomal protein L37ae (InterPro-IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro-IPR011331); BEST Arabidopsis thaliana protein match is- Zinc-binding ribosomal protein family protein ( [...] (92 aa)
   
  0.999
AT3G10950
Zinc-binding ribosomal protein family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit; Contains the following InterPro domains- Ribosomal protein, zinc-binding domain (InterPro-IPR011332), Ribosomal protein L37ae (InterPro-IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro-IPR011331); BEST Arabidopsis thaliana protein match is- Zinc-binding ribosomal protein family protein (TAIR-AT3G60245.1); Has 1048 Blast hits to 1048 proteins in 363 specie [...] (92 aa)
   
  0.999
AT4G17390
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit, nucleolus, membrane; Expressed in 25 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein L15e (InterPro-IPR000439), Ribosomal protein L23/L15e, core (InterPro-IPR012678), Ribosomal protein L15e, conserved site (InterPro-IPR020925); BEST Arabidopsis thaliana protein match is- Ribosomal protein L23/L15e family protein (TAIR-AT4G16720.1); Has 1 [...] (204 aa)
     
  0.999
AT4G16720
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L15e (InterPro-IPR000439), Ribosomal protein L23/L15e, core (InterPro-IPR012678), Ribosomal protein L15e, conserved site (InterPro-IPR020925); BEST Arabidopsis thaliana protein match is- Ribosomal protein L23/L15e family protein (TAIR-AT4 [...] (204 aa)
     
  0.999
AT4G27090
Ribosomal protein L14; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in 8 components; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L14 (InterPro-IPR002784); BEST Arabidopsis thaliana protein match is- Ribosomal protein L14 (TAIR-AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (134 aa)
     
  0.999
AT2G20450
Ribosomal protein L14; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L14 (InterPro-IPR002784); BEST Arabidopsis thaliana protein match is- Ribosomal protein L14 (TAIR-AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species- Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - [...] (134 aa)
     
  0.999
AT3G23390
Zinc-binding ribosomal protein family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L44e (InterPro-IPR000552), Ribosomal protein, zinc-binding domain (InterPro-IPR011332); BEST Arabidopsis thaliana protein match is- Zinc-binding ribosomal protein family protein (TAIR-AT3G23390.1) (154 aa)
     
  0.998
AT3G23390.1
Zinc-binding ribosomal protein family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L44e (InterPro-IPR000552), Ribosomal protein, zinc-binding domain (InterPro-IPR011332); BEST Arabidopsis thaliana protein match is- Zinc-binding ribosomal protein family protein (TAIR-AT4G14320.1); Has 1023 Blast hits to 1019 proteins in 360 species- Archae - 169; Bacter [...] (105 aa)
     
  0.998
AT5G56710
Ribosomal protein L31e family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, cell wall; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L31e (InterPro-IPR000054), Ribosomal protein L31e, conserved site (InterPro-IPR020052); BEST Arabidopsis thaliana protein match is- Ribosomal protein L31e family protein (TAIR-AT4G26230.1); Has 1085 Blast hits to 1085 proteins [...] (119 aa)
   
  0.998
AT4G26230
Ribosomal protein L31e family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L31e (InterPro-IPR000054), Ribosomal protein L31e, conserved site (InterPro-IPR020052); BEST Arabidopsis thaliana protein match is- Ribosomal protein L31e family protein (TAIR-AT5G56710.1); Has 1093 Blast hits to 1093 proteins in 354 species- Archae - 146; B [...] (119 aa)
   
  0.998
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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