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RPL18AA protein (Arabidopsis thaliana) - STRING interaction network
"RPL18AA" - 60S ribosomal protein L18A-1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL18AA60S ribosomal protein L18A-1 (312 aa)    
Predicted Functional Partners:
AT1G07070
60S ribosomal protein L35a-1 (112 aa)
     
 
  0.999
AT4G34670
Ribosomal protein S3Ae (262 aa)
     
 
  0.999
RPL23AB
Ribosomal protein L23AB; Binds to a specific region on the 26S rRNA (154 aa)
     
 
  0.999
RPL23AA
Ribosomal protein L23AA; Binds to a specific region on the 26S rRNA (154 aa)
     
 
  0.999
AT5G61170
40S ribosomal protein S19-3 (143 aa)
   
 
  0.999
AT5G15520
40S ribosomal protein S19-2 (143 aa)
   
 
  0.999
AT3G02080
40S ribosomal protein S19-1 (143 aa)
   
 
  0.999
At5g47320
Ribosomal protein S19; The RNA-binding domain found in RPS19 may functionally replaces the missing mitochondrial RPS13 (212 aa)
     
 
  0.999
AT5G60670
60S ribosomal protein L12-3; Binds directly to 26S ribosomal RNA (166 aa)
   
 
  0.998
AT3G53430
60S ribosomal protein L12-2; Binds directly to 26S ribosomal RNA (166 aa)
   
 
  0.998
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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