STRINGSTRING
PFD6 protein (Arabidopsis thaliana) - STRING interaction network
"PFD6" - Prefoldin 6 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFD6Prefoldin 6 (129 aa)    
Predicted Functional Partners:
PFD3
Prefoldin 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity) (195 aa)
     
   
  0.893
PFD1
PREFOLDIN 1 (128 aa)
     
   
  0.855
PFD5
Prefoldin 5; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity) (151 aa)
     
   
  0.751
PLP3a
Phosducin-like protein 3 homolog; Tubulin-binding protein involved in microtubule formation (230 aa)
     
   
  0.701
PLP3b
Phosducin-like protein 3 homolog; Tubulin-binding protein involved in microtubule formation (230 aa)
     
   
  0.696
AT3G03960
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. Contributes to stem cell maintenance through its impact on transcription factors trafficking through plasmodesmata (PubMed-21868675). Probably involved in refolding translocated, partially unfolded proteins, including viral movement proteins (PubMed-21868675, PubMed-22476462) (549 aa)
           
  0.684
AT4G15165
N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity) (208 aa)
           
  0.670
AT3G11830
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (557 aa)
           
  0.670
AIP3
ABI3-interacting protein 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity) (129 aa)
     
   
  0.665
AT2G18740
Putative small nuclear ribonucleoprotein (88 aa)
     
        0.633
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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