STRINGSTRING
AT1G30050 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30050" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30050Uncharacterized protein (389 aa)    
Predicted Functional Partners:
SS12
Strictosidine synthase 3; Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis (329 aa)
     
        0.438
AT3G55180
alpha/beta-Hydrolases superfamily protein (312 aa)
     
        0.437
GPX4
Glutathione peroxidase; May constitute a glutathione peroxidase-like protective system against oxidative stresses (170 aa)
     
        0.436
AT5G21080
Uncharacterized protein (1025 aa)
     
        0.435
AGC1.7
AGC kinase 1.7; Functions redudantly with AGC1-5 as signaling component in the pollen tube. Required for polarized growth of pollen tubes (555 aa)
     
        0.435
AT5G57200
ENTH/ANTH/VHS superfamily protein (591 aa)
     
        0.433
AT5G24940
Putative protein phosphatase 2C 71 (447 aa)
     
        0.431
AT3G28790
Uncharacterized protein (608 aa)
     
        0.429
AT3G28980
Uncharacterized protein (445 aa)
     
        0.428
AT3G55190
alpha/beta-Hydrolases superfamily protein (319 aa)
     
        0.427
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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