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AT1G30080 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30080" - Glycosyl hydrolase superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G30080Glycosyl hydrolase superfamily protein; Its function is described as cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in 9 plant structures; Expressed during 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Contains the following InterPro domains- Glycoside hydrolase, family 17 (InterPro-IPR000490), Glycoside hydrolase, catalytic core (InterPro-IPR017853), Glycoside hydrolase, subgroup, [...] (408 aa)    
Predicted Functional Partners:
AT1G77700
Pathogenesis-related thaumatin superfamily protein; Contains the following InterPro domains- Thaumatin, pathogenesis-related (InterPro-IPR001938); BEST Arabidopsis thaliana protein match is- thaumatin-like protein 3 (TAIR-AT1G75030.1); Has 1591 Blast hits to 1571 proteins in 178 species- Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 86; Plants - 1401; Viruses - 2; Other Eukaryotes - 9 (source- NCBI BLink) (356 aa)
           
  0.451
BFN1
Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops) (305 aa)
           
  0.451
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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