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AT1G30200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30200" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30200F-box protein (379 aa)    
Predicted Functional Partners:
AT5G27920
F-box protein (642 aa)
     
   
  0.756
AT1G67480
F-box/kelch-repeat protein (376 aa)
     
   
  0.747
AT1G29470
Putative methyltransferase PMT24 (770 aa)
           
  0.678
AT5G60570
F-box/kelch-repeat protein (393 aa)
           
  0.673
TLP9
Member of TLP family; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Confers sensitivity to ABA during seed germination and early seedling development (380 aa)
     
   
  0.633
TLP2
Member of TLP family (394 aa)
     
   
  0.614
AT1G72180
Leucine-rich receptor-like protein kinase (977 aa)
           
  0.609
At1g28440
HAESA-like 1 (996 aa)
           
  0.596
AT4G38860
SAUR-like auxin-responsive protein (105 aa)
           
  0.558
AT3G11930
Adenine nucleotide alpha hydrolases-like protein (226 aa)
           
  0.555
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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