• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
eEF-1Bb1 protein (Arabidopsis thaliana) - STRING interaction network
"eEF-1Bb1" - Glutathione S-transferase, C-terminal-like in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eEF-1Bb1Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (260 aa)    
Predicted Functional Partners:
AT1G57720
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
  0.999
AT1G09640
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
  0.999
At1g07940
GTP binding Elongation factor Tu family protein; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (449 aa)
     
  0.987
TCTP
Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes a [...] (168 aa)
     
 
  0.967
AT3G05540
Methionine sulfoxide reductase (MSS4-like) family protein; Regulates proliferation. Induces whole plant regeneration when expressed in heterologous systems. Involved in root growth and lateral root development, with a probable role in cell reprogramming. The long-distance transport of TCTP RNA and/or protein in plants may have an important role in regulation of growth and development (Probable) (168 aa)
     
 
  0.961
AT3G09200
Ribosomal protein L10 family protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
     
   
  0.942
PGY2
Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2; Belongs to the universal ribosomal protein uL6 family (194 aa)
     
   
  0.936
AT3G11250
Ribosomal protein L10 family protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (323 aa)
     
   
  0.934
AT5G27850
Ribosomal protein L18e/L15 superfamily protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L18e (InterPro-IPR000039), Ribosomal protein L18e/L15 (InterPro-IPR021131); BEST Arabidopsis thaliana protein match is- ribosomal protein L18 (TAIR-AT3G05590.1); Has 1807 Blast hits to 1807 proteins in 277 species- A [...] (187 aa)
     
 
  0.934
AT5G19510
Translation elongation factor EF1B/ribosomal protein S6 family protein; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (224 aa)
     
 
 
0.934
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]