STRINGSTRING
AT1G30290 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30290" - Unknown protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30290Unknown protein (806 aa)    
Predicted Functional Partners:
AT4G29750
CRS1 / YhbY (CRM) domain-containing protein (841 aa)
     
   
  0.916
AT1G31150
Uncharacterized protein (673 aa)
     
   
  0.915
AT1G11210
Uncharacterized protein (308 aa)
           
  0.869
AT3G12730
Myb family transcription factor (235 aa)
           
  0.710
SP1L2
SPIRAL1-like2; Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth (110 aa)
           
  0.710
QKY
QUIRKY; May be involved in Ca 2(+)-dependent signaling and membrane trafficking. Plays a role in fruit dehiscence (Probable). Components of the machinery involved in organ development mediated by the receptor-like kinase STRUBBELIG (SUB) (PubMed-19180193, PubMed-20298225) (1081 aa)
     
   
  0.691
ABCA5
ATP-binding cassette A5 (872 aa)
           
  0.678
NHL1
NDR1/HIN1-like 1 (209 aa)
           
  0.670
AT1G63750
TIR-NBS-LRR class disease resistance protein (1131 aa)
           
  0.609
LCR69
Defensin-like protein 2; Confers broad-spectrum resistance to pathogens (77 aa)
           
  0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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