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AT1G30350 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30350" - Pectin lyase-like superfamily protein in Arabidopsis thaliana
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second shell of interactors
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Predicted Interactions
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textmining
co-expression
protein homology
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AT1G30350Pectin lyase-like superfamily protein; Its function is described as lyase activity, pectate lyase activity; Involved in biological_process unknown; Located in endomembrane system; Expressed in petal, leaf whorl, sepal, flower; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), AmbAllergen (InterPro-IPR018082), Pectate lyase/Amb allergen (InterPro-IPR002022), Pectin lyase fold (InterPro-IPR012334); BEST Arabidopsis thaliana protein match is- Pectin lyase-like superfamil [...] (368 aa)    
Predicted Functional Partners:
AT5G17200
Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in leaf whorl, sperm cell, sepal, flower, pedicel; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Pectin lyase fold (InterPro-IPR012334), Glycoside hydrolase, family 28 (InterPro-IPR000743), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein match is- Pec [...] (421 aa)
   
 
  0.851
PPME1
Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains’ surrounding cells of the anthers; Belongs to the pectinesterase family (361 aa)
 
 
  0.847
PME31
Pectin methylesterase 31; Acts in the modification of cell walls via demethylesterification of cell wall pectin (By similarity). Acts in a blockwise manner, resulting in a cell wall rigidification; Belongs to the pectinesterase family (317 aa)
 
   
  0.810
AT3G59850
Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in embryo, pedicel; Expressed during 4 anthesis, C globular stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Pectin lyase fold (InterPro-IPR012334), Glycoside hydrolase, family 28 (InterPro-IPR000743), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein match is- Pectin lyase-like superfamily protein (TAIR-AT2G43870.1); H [...] (388 aa)
       
  0.788
VGDH1
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin. Plays an important role in growth of pollen tubes in female floral tissues, possibly via enhancing the interaction between the pollen tube and female floral tissues by modification of the cell walls; In the N-terminal section; belongs to the PMEI family (588 aa)
 
 
  0.788
AT5G49180
Plant invertase/pectin methylesterase inhibitor superfamily; Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds; In the C-terminal section; belongs to the pectinesterase family (571 aa)
 
 
  0.776
AT5G27870
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the N-terminal section; belongs to the PMEI family (732 aa)
 
 
  0.771
ADPG1
Pectin lyase-like superfamily protein; Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding (431 aa)
   
 
  0.766
AT3G05610
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the N-terminal section; belongs to the PMEI family (669 aa)
 
 
  0.765
PE11
Putative pectinesterase 11; Acts in the modification of cell walls via demethylesterification of cell wall pectin; Belongs to the pectinesterase family (352 aa)
 
   
  0.752
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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