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DRT111 protein (Arabidopsis thaliana) - STRING interaction network
"DRT111" - DNA-damage-repair/toleration protein DRT111, chloroplastic in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DRT111DNA-damage-repair/toleration protein DRT111, chloroplastic; Seems to be involved in the resistance to UV light and chemical DNA-damaging agents. Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (387 aa)    
Predicted Functional Partners:
AT5G64270
Splicing factor, putative; Its function is described as binding; Involved in mRNA processing; Located in chloroplast; Expressed in 26 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- HEAT (InterPro-IPR000357), Armadillo-like helical (InterPro-IPR011989), Splicing factor 3B subunit 1 (InterPro-IPR015016), HEAT, type 2 (InterPro-IPR021133), Armadillo-type fold (InterPro-IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source [...] (1269 aa)
     
  0.997
CDC5
Cell division cycle 5-like protein; Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Possesses a sequence specific DNA sequence ’CTCAGCG’ binding activity. Involved in mRNA splicing and cell cycle control. May also play a role in the response to DNA damage; Belongs to the CEF1 family (844 aa)
     
  0.991
SUA
SUPPRESSOR OF ABI3-5; Splicing factor that controls alternative splicing of the developmental regulator ABI3. Reduces splicing of a cryptic intron in ABI3, leading to a decreased in ABI3-beta transcript. Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (1008 aa)
     
  0.991
AT2G32600
Hydroxyproline-rich glycoprotein family protein; Its function is described as zinc ion binding, nucleic acid binding; Involved in biological_process unknown; Located in nucleus, intracellular, spliceosomal complex; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, C2H2-like (InterPro-IPR015880), Zinc finger, U1-type (InterPro-IPR003604), Zinc finger, C2H2-type matrin (InterPro-IPR000690); Has 18078 Blast hits to 8181 proteins in 576 species- Archae - 26; Bacteria - 1885; Metazoa - 7255; Fungi - 1800; Plants - 3678 [...] (277 aa)
     
  0.987
RRC1
RNA recognition motif (RRM)-containing protein; SR-like splicing factor required for phytochrome B (phyB) signal transduction and involved in phyB-dependent alternative splicing (946 aa)
     
    0.985
EMB2769
Cwf15 / Cwc15 cell cycle control family protein; EMBRYO DEFECTIVE 2769 (EMB2769); Its function is described as molecular_function unknown; Involved in nuclear mRNA splicing, via spliceosome; Located in spliceosomal complex; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Cwf15/Cwc15 cell cycle control protein (InterPro-IPR006973); Has 4871 Blast hits to 3670 proteins in 321 species- Archae - 3; Bacteria - 193; Metazoa - 1657; Fungi - 645; Plants - 225; Viruses - 150; Other Eukaryotes - 1998 (source- NCBI BLink) (230 aa)
     
    0.979
AT2G01440
ATP-dependent DNA helicase homolog RECG, chloroplastic; Critical role in recombination and DNA repair (973 aa)
     
   
  0.968
AT5G10800
RNA recognition motif (RRM)-containing protein; Probable SR-like splicing factor (947 aa)
     
    0.962
ATO
Splicing factor SF3a60 homolog; Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes; Belongs to the SF3A3 family (504 aa)
     
  0.961
AT3G62310
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2; May be involved in pre-mRNA splicing (726 aa)
     
  0.958
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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