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AT1G30700 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30700" - FAD-binding Berberine family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G30700FAD-binding Berberine family protein; Its function is described as electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; Located in endomembrane system; Expressed in stem, hypocotyl, root, stamen; Expressed during 4 anthesis; Contains the following InterPro domains- FAD-binding, type 2 (InterPro-IPR016166), Berberine/berberine-like (InterPro-IPR012951), FAD linked oxidase, N-terminal (InterPro-IPR006094); BEST Arabidopsis thaliana protein match is- FAD-binding Berberine family protein (TAIR-AT1G30710.1); Has 4734 Blast hits to 4686 proteins in 819 species [...] (527 aa)    
Predicted Functional Partners:
AT3G04640
Glycine-rich protein; Has 42937 Blast hits to 13549 proteins in 1124 species- Archae - 42; Bacteria - 16604; Metazoa - 12821; Fungi - 2296; Plants - 5249; Viruses - 609; Other Eukaryotes - 5316 (source- NCBI BLink) (159 aa)
           
  0.732
DIN2
Glycosyl hydrolase superfamily protein; Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene’s expression pattern is responding to the level of sugar in the cell (577 aa)
     
   
  0.721
CYP89A9
Cytochrome P450, family 87, subfamily A, polypeptide 9; Involved in the chlorophyll breakdown by its action in nonpolar fluorescent chlorophyll catabolite (FCC) decarbonylation (511 aa)
     
   
  0.705
AT5G25930
Protein kinase family protein with leucine-rich repeat domain; Its function is described as kinase activity; Involved in protein amino acid phosphorylation; Located in plasma membrane, membrane; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, catalytic domain (InterPro-IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro-IPR013210), Leucine-rich repeat (InterPro-IPR001611), Serine/threonine-protein kinase-like domain (InterPro-IP [...] (1005 aa)
     
   
  0.693
AT2G45220
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (511 aa)
     
        0.673
UGT73B5
UDP-glucosyl transferase 73B5; Possesses quercetin 3-O-glucosyltransferase activity in vitro. Involved in stress or defense responses; Belongs to the UDP-glycosyltransferase family (494 aa)
     
   
  0.659
NIT4
Bifunctional nitrilase/nitrile hydratase NIT4; Highly specific for beta-cyano-L-alanine (Ala(CN)). Low activity with 3-phenylpropionitrile (PPN) or allylcyanide and no activity with indole-3-acetonitrile. Not associated with auxin production but may be involved in cyanide detoxification (355 aa)
     
   
  0.641
MLO6
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature roset [...] (583 aa)
     
   
  0.640
AT4G15610
Uncharacterised protein family (UPF0497); Contains the following InterPro domains- Uncharacterised protein family UPF0497, trans-membrane plant (InterPro-IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro-IPR006459); BEST Arabidopsis thaliana protein match is- Uncharacterised protein family (UPF0497) (TAIR-AT3G06390.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink); Belongs to the Casparian strip membrane [...] (193 aa)
     
        0.632
GSTU25
Glutathione S-transferase TAU 25; May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides (221 aa)
     
   
  0.631
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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