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AT1G30790 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30790" - F-box and associated interaction domains-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G30790F-box and associated interaction domains-containing protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 3 (InterPro-IPR013187), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G32660.1); Has 2039 Blast hits to 1970 proteins in 46 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2039; Viruses - 0; Other Eukaryotes - 0 (source- [...] (399 aa)    
Predicted Functional Partners:
AT1G30890
Integral membrane HRF1 family protein; Contains the following InterPro domains- Hrf1 (InterPro-IPR005578); BEST Arabidopsis thaliana protein match is- Integral membrane HRF1 family protein (TAIR-AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species- Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source- NCBI BLink) (269 aa)
           
  0.839
AT5G52880
F-box family protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (269 aa)
           
  0.837
AT3G24760
Galactose oxidase/kelch repeat superfamily protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro-IPR011043), Kelch-type beta propeller (InterPro-IPR015915); BEST Arabidopsis thaliana protein match is- Kelch repeat-containing F-box family protein (TAIR-AT1G23390.1); Has 250 Blast hits to 250 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (383 aa)
           
  0.837
AT2G24250
F-box/kelch-repeat protein At2g24250; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), Protein of unknown function DUF295 (InterPro-IPR005174); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF295) (TAIR-AT1G64840.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (374 aa)
           
  0.837
AT1G67190
F-box/LRR-repeat protein At1g67190; F-box/RNI-like superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364); BEST Arabidopsis thaliana protein match is- F-box/RNI-like superfamily protein (TAIR-AT1G10780.1) (419 aa)
           
  0.837
SK16
SKP1-like protein 16; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (170 aa)
       
 
  0.836
AT1G60570
Galactose oxidase/kelch repeat superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in flower, cultured cell; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro-IPR011043), Kelch repeat type 1 (InterPro-IPR006652), Kelch related (InterPro-IPR013089), Kelch-type beta propeller (InterPro-IPR015915); BEST Arabidopsis thaliana prote [...] (381 aa)
     
   
  0.832
AT3G08750
F-box and associated interaction domains-containing protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 1 (InterPro-IPR006527), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interacti [...] (369 aa)
           
  0.830
AT1G51290
F-box and associated interaction domains-containing protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 1 (InterPro-IPR006527), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G51320.1); Has 1610 Blast hits to 1571 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1609; Viruses - 0; Other Eukaryotes - 1 (source- [...] (377 aa)
           
  0.830
SK19
SKP1-like protein 19; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity); Belongs to the SKP1 family (200 aa)
     
 
  0.822
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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