• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G30795 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30795" - Glycine-rich protein family in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30795Glycine-rich protein family; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 8 plant structures; Expressed during 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 44 Blast hits to 42 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 2; Plants - 29; Viruses - 2; Other Eukaryotes - 4 (source- NCBI BLink) (109 aa)    
Predicted Functional Partners:
AAE11
AMP-dependent synthetase and ligase family protein; Butyrate--CoA ligase that is active in vitro with medium-chain fatty acids, with a preference for hexanoate and octanoate; Belongs to the ATP-dependent AMP-binding enzyme family (572 aa)
     
        0.416
LCR17
Low-molecular-weight cysteine-rich 17; Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family (96 aa)
     
        0.416
AT5G07420
Pectin lyase-like superfamily protein; Acts in the modification of cell walls via demethylesterification of cell wall pectin (361 aa)
     
        0.407
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]